[2-DE profiling and differential analysis of human bronchial epithelial tissues in different stages of carcinogenesis].
摘要
BACKGROUND & OBJECTIVE: The carcinogenesis of bronchial epithelial cells is a complex multiple-stage process involving multiple genes, but its mechanism remains unclear. Studying this process with proteomic approaches may identify carcinogenesis-associated proteins, which are important for elucidating carcinogenic mechanism of human lung squamous carcinoma. This study was designed to optimize the protein preparation methods for bronchial epithelial tissues, to establish two-dimensional gel electrophoresis profiles of human bronchial epithelial tissues from different stages in carcinogenic process, and to perform differential analysis and provide a basis for identifying carcinogenesis-associated proteins of lung squamous carcinoma. METHODS: After obtaining samples of the normal, metaplasia, dysplasia, carcinoma tissues of human bronchial epithelia, modified deoxycholate- trichloroaetic acid (DOC-TCA) precipitation was used to extract and purify the total proteins of bronchial epithelial samples. Immobilized pH gradient two-dimensional polyacrylamide gel electrophoresis (2-DE) was used to separate the total proteins of the samples. After silver staining, ImageMaster 2-DE image analysis software was applied to analyze 2-DE images. Some selected differential protein spots were identified by peptide mass fingerprint (PMF) based on matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF-MS) and database search. RESULTS: The total proteins extracted with the method described here were used to perform 2-DE. 2-DE patterns with high resolution and reproducibility from different stages were obtained. The average spots for normal epithelium, metaplasia, dysplasia and invasive carcinoma were 1189.50+/-39.89, 1227.00+/-37.90, 1273.00+/-43.31, and 1326.00+/-66.63, respectively. The test was repeated, which showed that there were average 1216 +/- 75 spots among 3 gels of the same metaplasia tissues and 1082 +/- 67 spots were matched. The average matc